Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1328

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1327: 9695 - K14684 SLC25A23S solute carrier family 25 (mitochondrial phosphate transporter), member 23/24/25/41, at 2473 to 5541 9695 mRNA_1328: 9696 - SUPERFAMILY--SSF82708, at 5867 to 7721 9696 mRNA_1329: 9697 - HMMPfam-SUZ domain-PF12752,ProSiteProfiles-SUZ domain profile.-PS51673, at 8055 to 8960 9697

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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4,938 + 9695 mRNA_1327 0.80 0.2
5,367 - 0.4
5,399 - 0.1
5,655 - -1.4
5,846 + 0.7
5,952 - -1.0
6,136 + 9696 mRNA_1328 0.15 -0.3
6,296 - 9696 mRNA_1328 0.23 -1.4
6,297 + 9696 mRNA_1328 0.23 0.4
6,319 + 9696 mRNA_1328 0.24 -0.8
6,399 - 9696 mRNA_1328 0.29 -1.2
6,430 - 9696 mRNA_1328 0.30 0.5
6,442 + 9696 mRNA_1328 0.31 3.9
6,445 - 9696 mRNA_1328 0.31 0.9
6,699 + 9696 mRNA_1328 0.45 0.6
7,004 - 9696 mRNA_1328 0.61 -0.2
7,319 - 9696 mRNA_1328 0.78 0.2
7,321 + 9696 mRNA_1328 0.78 1.2
7,459 - 9696 mRNA_1328 0.86 -1.6
7,532 - 9696 mRNA_1328 0.90 0.3
7,702 - 0.5
7,712 - 0.7
7,723 - 0.1
7,723 - -1.8
7,740 + 0.4
7,796 + -0.1
7,851 + 0.1
7,936 - 0.7
7,968 + 1.0
7,968 - 1.3
7,976 - 2.3
8,393 - 9697 mRNA_1329 0.37 0.1
8,402 - 9697 mRNA_1329 0.38 0.9
8,435 - 9697 mRNA_1329 0.42 -0.8
8,577 + 9697 mRNA_1329 0.58 1.6
8,599 + 9697 mRNA_1329 0.60 0.5
8,603 + 9697 mRNA_1329 0.60 0.1
8,708 + 9697 mRNA_1329 0.72 0.1