Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1326

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1326: 9694 - KOG1239 Inner membrane protein translocase involved in respiratory chain assembly, at 227 to 1696 9694 mRNA_1327: 9695 - K14684 SLC25A23S solute carrier family 25 (mitochondrial phosphate transporter), member 23/24/25/41, at 2473 to 5541 9695

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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1 + 0.2
25 + -0.2
49 - 0.4
50 + 1.2
53 + -3.3
57 - -0.4
57 + 2.4
58 - 0.4
62 + -0.6
62 - -0.5
76 + 1.4
109 + -0.5
122 + 1.0
125 - 1.9
126 + 0.9
128 - 0.4
134 + -2.2
143 + -0.6
144 + 0.4
148 + 0.7
176 - -1.4
186 + -0.2
199 + 0.7
240 + -0.3
240 + 0.5
250 + 1.3
250 + -0.8
256 - 0.1
279 + 1.4
282 + 0.6
286 - 1.9
290 + -0.6
542 - 9694 mRNA_1326 0.21 -0.1
545 + 9694 mRNA_1326 0.22 2.2
726 - 9694 mRNA_1326 0.34 0.5
1,007 + 9694 mRNA_1326 0.53 0.1
1,016 - 9694 mRNA_1326 0.54 1.0
1,322 - 9694 mRNA_1326 0.74 0.5
1,417 - 9694 mRNA_1326 0.81 -0.6
1,888 - -0.4
1,889 - 0.4
2,000 + -0.6
2,009 + -0.3
2,141 - -1.0
2,152 - 1.0
2,166 + 1.0
2,167 + 0.6
2,173 + -1.2
2,180 - -1.1
2,180 + 0.3
2,189 + 0.1
2,189 + 1.5
2,197 + -0.5
2,246 + -1.4
2,333 - 1.3
2,471 + -1.7
2,490 + -1.1