Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1264

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1263: 9631 - K06130 LYPLA2 lysophospholipase II, at 782267 to 783226 9631 mRNA_1264: 9632 - HMMPfam-Mitochondrial ribosomal protein subunit L20-PF12824, at 783698 to 784459 9632 mRNA_1265: 9633 - K14861 URB1 nucleolar pre-ribosomal-associated protein 1, at 784543 to 790877 9633

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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782,909 + 9631 mRNA_1263 0.67 -0.4
783,049 - 9631 mRNA_1263 0.81 -1.9
783,085 - 9631 mRNA_1263 0.85 -0.2
783,098 + 9631 mRNA_1263 0.87 2.5
783,217 - 1.2
783,363 + -1.5
783,489 - 0.4
783,615 - -0.7
783,625 - 0.0
783,709 - 0.6
784,354 + 9632 mRNA_1264 0.86 0.6
784,355 + 9632 mRNA_1264 0.86 1.5
784,358 - 9632 mRNA_1264 0.87 0.5
784,358 + 9632 mRNA_1264 0.87 -0.6
784,359 - 9632 mRNA_1264 0.87 -1.0
784,363 + 9632 mRNA_1264 0.87 -1.6
784,372 - 9632 mRNA_1264 0.88 -1.4
784,381 + 9632 mRNA_1264 0.90 -1.9
784,415 - 1.9
784,489 - -1.7
784,526 + 0.4