Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1211

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1210: 9578 - K13076 SLD Delta8-fatty-acid desaturase, at 657953 to 659955 9578 mRNA_1211: 9579 - K15078 SLX1 structure-specific endonuclease subunit SLX1, at 660116 to 662467 9579 mRNA_1212: 9580 - HMMPfam-Regulator of G protein signaling domain-PF00615,ProSiteProfiles-RGS domain profile.-PS50132,SMART-Regulator of G protein signalling domain-SM00315,SUPERFAMILY--SSF48097, at 663108 to 664692 9580

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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659,920 - 1.6
659,935 - 0.0
660,304 - -0.6
660,650 - 9579 mRNA_1211 0.23 -0.1
660,977 - 9579 mRNA_1211 0.37 -0.1
662,460 + 0.3
662,572 + 0.8
662,685 - 2.4
662,687 - 0.7
662,843 - 2.0