Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1191

Experiments: 40 hrs High Buoyancy

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1190: 9558 - K05747 WAS Wiskott-Aldrich syndrome protein, at 613058 to 614661 9558 mRNA_1191: 9559 - KOG3033 Predicted PhzC/PhzF-type epimerase, at 615062 to 616261 9559 mRNA_1192: 9560 - KOG2504 Monocarboxylate transporter, at 616392 to 618414 9560

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
remove
614,552 - 1.0
614,577 + 0.6
614,713 - 0.3
614,740 - -1.3
614,964 - -0.5
614,974 + -0.0
614,990 + 0.1
614,991 - -1.0
614,995 + 0.2
615,125 - -1.0
615,138 - 1.3
615,149 + 0.2
615,152 - -0.3
615,377 + 9559 mRNA_1191 0.26 0.5
615,405 - 9559 mRNA_1191 0.29 -0.0
615,405 - 9559 mRNA_1191 0.29 0.7
615,409 - 9559 mRNA_1191 0.29 1.8
615,486 + 9559 mRNA_1191 0.35 -0.7
615,577 - 9559 mRNA_1191 0.43 0.2
615,708 - 9559 mRNA_1191 0.54 0.7
615,718 + 9559 mRNA_1191 0.55 -0.6
615,754 + 9559 mRNA_1191 0.58 -1.9
616,021 - 9559 mRNA_1191 0.80 3.5
616,056 - 9559 mRNA_1191 0.83 -0.8
616,129 - 9559 mRNA_1191 0.89 -0.4
616,130 + 9559 mRNA_1191 0.89 0.2
616,130 + 9559 mRNA_1191 0.89 -0.5
616,144 - -0.6
616,153 + -0.6
616,283 + 0.1
616,305 - -0.5
616,405 + -1.9
616,597 - 9560 mRNA_1192 0.10 -0.1
616,608 + 9560 mRNA_1192 0.11 -0.1
616,618 + 9560 mRNA_1192 0.11 0.1
616,730 + 9560 mRNA_1192 0.17 0.5
616,731 + 9560 mRNA_1192 0.17 -2.6
616,735 + 9560 mRNA_1192 0.17 1.0
616,844 - 9560 mRNA_1192 0.22 -0.2
616,888 - 9560 mRNA_1192 0.25 4.4
616,898 + 9560 mRNA_1192 0.25 -1.3
616,992 - 9560 mRNA_1192 0.30 0.5
617,014 - 9560 mRNA_1192 0.31 -0.7
617,171 + 9560 mRNA_1192 0.39 -1.1