Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1178

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1177: 9545 - K15326 TSEN54 tRNA-splicing endonuclease subunit Sen54, at 580188 to 581963 9545 mRNA_1178: 9546 - Hypothetical Protein, at 582125 to 583749 9546 mRNA_1179: 9547 - K12611 DCP1B mRNA-decapping enzyme 1B, at 584015 to 586277 9547

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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582,045 + -0.3
582,060 - 1.5
582,084 + -2.2
582,207 + 1.9
582,254 + -0.5
582,552 - 9546 mRNA_1178 0.26 -0.2
583,043 - 9546 mRNA_1178 0.56 1.8
583,070 + 9546 mRNA_1178 0.58 -0.3
583,368 + 9546 mRNA_1178 0.76 1.2
583,942 + 0.0
583,942 + -2.1
583,964 + -1.5
583,966 + 0.4
584,696 + 9547 mRNA_1179 0.30 0.4