Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1154

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1153: 9521 - K13513 LCLAT1, AGPAT8 lysocardiolipin and lysophospholipid acyltransferase, at 524550 to 526104 9521 mRNA_1154: 9522 - Hypothetical Protein, at 526597 to 527643 9522 mRNA_1155: 9523 - ProSiteProfiles-CBS domain profile.-PS51371,SUPERFAMILY--SSF54631, at 528482 to 529504 9523

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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525,743 + 9521 mRNA_1153 0.77 0.8
525,769 + 9521 mRNA_1153 0.78 -0.4
526,021 - -1.2
526,177 + -2.0
526,446 + -0.2
526,479 - -0.9
526,481 + 1.1
526,508 + 1.5
526,509 - 0.9
526,605 - -0.4
526,761 + 9522 mRNA_1154 0.16 1.7
526,771 + 9522 mRNA_1154 0.17 -0.9
526,941 - 9522 mRNA_1154 0.33 1.0
526,952 + 9522 mRNA_1154 0.34 0.5
526,954 - 9522 mRNA_1154 0.34 1.2
527,218 + 9522 mRNA_1154 0.59 0.6
527,551 - -4.7
527,656 + 0.3
528,215 - 0.7
528,373 - 0.8
528,439 - -0.4
528,537 + 0.9