Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1136

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1135: 9503 - K04532 NAE1, APPBP1 amyloid beta precursor protein binding protein 1, at 489828 to 492159 9503 mRNA_1136: 9504 - Hypothetical Protein, at 492324 to 493013 9504 mRNA_1137: 9505 - KOG2363 Protein subunit of nuclear ribonuclease P (RNase P), at 493433 to 494833 9505

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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492,299 + -1.4
492,332 - -0.2
492,387 + -0.3
492,480 + 9504 mRNA_1136 0.23 -1.1
492,494 - 9504 mRNA_1136 0.25 -0.5
492,572 - 9504 mRNA_1136 0.36 0.2
492,591 + 9504 mRNA_1136 0.39 1.0
492,744 + 9504 mRNA_1136 0.61 -0.1
492,831 + 9504 mRNA_1136 0.73 0.4
492,832 - 9504 mRNA_1136 0.74 -0.5
492,860 + 9504 mRNA_1136 0.78 0.7
493,010 + -1.1
493,029 + 0.1