Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1091

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1090: 9458 - K12393 AP1M AP-1 complex subunit mu, at 384249 to 386320 9458 mRNA_1091: 9459 - Hypothetical Protein, at 386691 to 388371 9459 mRNA_1092: 9460 - SUPERFAMILY--SSF52833, at 388491 to 389761 9460

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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386,407 - -2.8
386,637 + -0.2
386,690 - -1.4
387,121 - 9459 mRNA_1091 0.26 0.6
387,397 + 9459 mRNA_1091 0.42 -2.7
387,430 - 9459 mRNA_1091 0.44 -1.1
387,736 + 9459 mRNA_1091 0.62 -1.1
387,900 + 9459 mRNA_1091 0.72 -0.7
387,996 - 9459 mRNA_1091 0.78 -1.0
388,001 - 9459 mRNA_1091 0.78 -0.4
388,003 - 9459 mRNA_1091 0.78 0.5
388,008 + 9459 mRNA_1091 0.78 -0.1
388,012 - 9459 mRNA_1091 0.79 2.3
388,466 - 1.5
388,768 + 9460 mRNA_1092 0.22 -0.4
388,880 - 9460 mRNA_1092 0.31 -0.5
388,904 + 9460 mRNA_1092 0.32 -0.3
388,931 - 9460 mRNA_1092 0.35 -0.1
389,031 - 9460 mRNA_1092 0.42 -2.1
389,094 - 9460 mRNA_1092 0.47 -0.2
389,183 - 9460 mRNA_1092 0.54 -0.3
389,218 + 9460 mRNA_1092 0.57 -0.2
389,218 + 9460 mRNA_1092 0.57 2.2
389,242 - 9460 mRNA_1092 0.59 0.8
389,295 - 9460 mRNA_1092 0.63 1.5
389,333 - 9460 mRNA_1092 0.66 -0.7