Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1086

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1085: 9453 - Hypothetical Protein, at 373772 to 374332 9453 mRNA_1086: 9454 - Hypothetical Protein, at 374386 to 377567 9454 mRNA_1087: 9455 - KOG2793 Putative N2,N2-dimethylguanosine tRNA methyltransferase, at 377970 to 379646 9455

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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373,551 + -0.4
373,591 - -1.5
373,591 - -1.5
373,597 + 0.4
373,597 - 0.1
373,746 - 0.8
373,790 - 1.6
373,888 - 9453 mRNA_1085 0.21 2.6
373,919 + 9453 mRNA_1085 0.26 0.0
373,937 - 9453 mRNA_1085 0.29 -0.3
374,882 + 9454 mRNA_1086 0.16 -0.4
374,903 + 9454 mRNA_1086 0.16 1.0
375,227 + 9454 mRNA_1086 0.26 0.1
375,593 - 9454 mRNA_1086 0.38 1.1
375,625 - 9454 mRNA_1086 0.39 -3.1
375,627 + 9454 mRNA_1086 0.39 -2.6
375,946 + 9454 mRNA_1086 0.49 -1.0
376,326 + 9454 mRNA_1086 0.61 0.7
376,464 + 9454 mRNA_1086 0.65 0.6
376,490 + 9454 mRNA_1086 0.66 -1.3
376,571 + 9454 mRNA_1086 0.69 2.0
376,573 - 9454 mRNA_1086 0.69 -0.6
376,639 + 9454 mRNA_1086 0.71 0.1
376,845 + 9454 mRNA_1086 0.77 0.9
377,013 - 9454 mRNA_1086 0.83 -2.1
377,065 + 9454 mRNA_1086 0.84 1.1
377,086 - 9454 mRNA_1086 0.85 -0.5
377,194 + 9454 mRNA_1086 0.88 -0.1
377,214 - 9454 mRNA_1086 0.89 -1.1
377,343 - 0.0
377,487 - -1.5
377,826 - 0.1
377,839 + -1.2
377,861 - -1.7
377,978 - -0.6
378,230 - 9455 mRNA_1087 0.16 0.0