Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1035

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1034: 9402 - SMART-N-terminal domain of CBF1 interacting co-repressor CIR-SM01083, at 249444 to 250770 9402 mRNA_1035: 9403 - Hypothetical Protein, at 251182 to 253017 9403 mRNA_1036: 9404 - K12590 RRP46, EXOSC5 exosome complex component RRP46, at 253170 to 254250 9404

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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250,187 - 9402 mRNA_1034 0.56 1.5
250,244 + 9402 mRNA_1034 0.60 1.2
250,421 - 9402 mRNA_1034 0.74 -0.5
250,809 + -0.4
250,821 + 0.4
250,979 + 1.9
251,125 - -0.6
251,126 - -1.2
251,258 + -1.2
251,265 - -0.2
251,298 + -0.5
251,386 - 9403 mRNA_1035 0.11 -0.2
251,429 + 9403 mRNA_1035 0.13 0.3
251,551 + 9403 mRNA_1035 0.20 -0.7
251,552 + 9403 mRNA_1035 0.20 0.5
251,700 - 9403 mRNA_1035 0.28 1.0
251,898 + 9403 mRNA_1035 0.39 -0.9
252,410 + 9403 mRNA_1035 0.67 -0.3
253,029 + 0.3
253,151 + 1.5
253,269 - 0.0