Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1007

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1006: 9374 - KOG4569 Predicted lipase, at 188789 to 191273 9374 mRNA_1007: 9375 - HMMPfam-S1/P1 Nuclease-PF02265,SUPERFAMILY--SSF48537, at 191628 to 193033 9375 mRNA_1008: 9376 - BLAST expressed protein [Cryptococcus neoformans var. neofo..., at 193375 to 193873 9376

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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190,635 + 9374 mRNA_1006 0.74 -1.8
190,782 + 9374 mRNA_1006 0.80 0.6
190,919 + 9374 mRNA_1006 0.86 0.2
190,941 + 9374 mRNA_1006 0.87 0.5
191,002 - 9374 mRNA_1006 0.89 0.2
191,165 + -0.4
191,619 + 0.4
192,239 + 9375 mRNA_1007 0.43 0.9
192,346 - 9375 mRNA_1007 0.51 1.7
192,491 - 9375 mRNA_1007 0.61 2.3
192,933 + 0.3
193,240 - 1.5
193,418 + -0.1
193,652 - 9376 mRNA_1008 0.56 0.2
193,652 - 9376 mRNA_1008 0.56 -0.7
193,668 - 9376 mRNA_1008 0.59 0.2
193,680 + 9376 mRNA_1008 0.61 -0.5
193,806 - 9376 mRNA_1008 0.86 -0.6
193,830 - 2.7
193,832 + 0.8
193,950 - -0.4
193,953 - 0.2
193,963 - -0.3
193,965 - -1.2
193,971 + -0.8
193,971 - -0.4
193,974 - 0.2
193,974 - 0.5
193,975 + -0.4
193,978 - 0.1
193,988 - 0.0
193,990 + -0.1
194,000 + 0.5