Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_955

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_954: 9322 - K16261 YAT yeast amino acid transporter, at 55166 to 57720 9322 mRNA_955: 9323 - Hypothetical Protein, at 58639 to 63739 9323 mRNA_956: 9324 - KOG2466 Uridine permease/thiamine transporter/allantoin transport, at 64037 to 66119 9324

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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57,888 - 2.0
58,061 - -3.0
58,483 + 1.0
58,649 + 0.6
58,936 - -0.6
58,947 + -0.7
59,228 + 9323 mRNA_955 0.12 0.0
59,238 - 9323 mRNA_955 0.12 1.0
59,245 + 9323 mRNA_955 0.12 0.1
59,344 + 9323 mRNA_955 0.14 -0.6
59,376 - 9323 mRNA_955 0.14 1.7
59,612 + 9323 mRNA_955 0.19 0.1
60,605 + 9323 mRNA_955 0.39 -2.1
60,718 - 9323 mRNA_955 0.41 1.7
61,023 - 9323 mRNA_955 0.47 0.1
61,073 - 9323 mRNA_955 0.48 0.6
61,233 - 9323 mRNA_955 0.51 2.1
61,242 - 9323 mRNA_955 0.51 -0.0
61,275 + 9323 mRNA_955 0.52 0.1
61,764 + 9323 mRNA_955 0.61 -0.8
61,955 + 9323 mRNA_955 0.65 1.0
62,153 - 9323 mRNA_955 0.69 1.6
62,159 + 9323 mRNA_955 0.69 1.6
62,361 - 9323 mRNA_955 0.73 -0.6
62,439 + 9323 mRNA_955 0.74 2.9
62,507 + 9323 mRNA_955 0.76 -2.5
62,517 - 9323 mRNA_955 0.76 -1.4
62,523 + 9323 mRNA_955 0.76 1.8
62,524 + 9323 mRNA_955 0.76 -0.2
62,552 - 9323 mRNA_955 0.77 -1.0
62,731 + 9323 mRNA_955 0.80 1.0
62,744 - 9323 mRNA_955 0.80 0.4
62,744 - 9323 mRNA_955 0.80 0.8
63,059 + 9323 mRNA_955 0.87 2.8
63,068 - 9323 mRNA_955 0.87 1.9
63,206 - 9323 mRNA_955 0.90 0.1
63,260 + 0.8
63,474 + 1.0
63,856 - -0.6
64,193 + -1.0
64,227 - 2.0
64,494 + 9324 mRNA_956 0.22 0.7