Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_930

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_930: 9298 - K00861 RFK, FMN1 riboflavin kinase, at 359 to 1600 9298 mRNA_931: 9299 - K14794 RRP12 ribosomal RNA-processing protein 12, at 1838 to 6021 9299

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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1 + 0.0
1 + 1.3
1 + -0.9
1 + 0.9
1 + -1.1
2 + 0.3
2 + -0.9
5 + 0.7
18 + 1.1
30 + -1.1
37 + 0.6
37 + -1.0
41 + 0.4
42 + 0.0
44 + 0.4
49 + 0.6
49 + 0.9
50 + 0.3
54 + -0.3
58 - 0.2
60 - 0.0
60 + -0.4
60 - -0.4
61 - -0.2
61 + 0.2
63 + 2.5
63 + -0.8
63 + 0.0
63 + 0.1
63 + 0.5
63 + 1.0
64 + 1.1
66 - 0.2
66 + -0.2
70 + -1.6
70 + -0.6
70 - -0.1
71 + -1.9
73 + 0.5
75 - 0.1
77 - 1.1
78 + -0.3
78 - -0.3
78 + -0.0
78 + 2.3
78 + -0.0
78 + -0.8
78 + -0.1
78 + 0.7
78 + 0.3
79 + 0.3
81 - 1.1
81 - -1.8
82 + -0.1
85 + 0.1
104 + -0.8
126 + 0.2
126 + 0.2
128 - -0.4
135 + -0.1
142 + -0.9
150 + 1.2
154 + 0.2
157 + -0.7
171 - 1.9
171 + 0.7
172 + -0.4
172 + 0.5
175 - -1.2
176 - 1.1
177 - 1.6
177 - 0.4
191 - -0.6
192 + 0.9
192 + 0.4
192 + 0.2
193 + -1.7
193 + 0.4
193 + -1.7
198 - -0.3
218 + 1.7
225 + 0.4
235 + -1.2
242 + 0.2
263 - -0.8
293 + 0.0
303 + 0.2
333 - 0.3
339 - 2.5
348 + 0.4
349 + 0.5
377 - 1.9
381 - -0.4
469 + 0.0
487 - 9298 mRNA_930 0.10 -0.6
722 + 9298 mRNA_930 0.29 -1.4
1,641 - -0.3
1,656 - -0.5
1,768 - 0.1
1,778 - 2.6
1,794 + 0.9