Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_670

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_669: 9037 - K01689 ENO, eno enolase, at 1611479 to 1614227 9037 mRNA_670: 9038 - Hypothetical Protein, at 1615101 to 1618146 9038 mRNA_671: 9039 - K03846 ALG9 alpha-1,2-mannosyltransferase, at 1618473 to 1620853 9039

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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1,614,263 + -0.2
1,614,322 - -0.6
1,614,371 - -0.4
1,614,396 - -0.8
1,614,409 + -0.3
1,614,410 + -0.4
1,614,415 - -1.2
1,614,557 + 0.4
1,614,576 - 0.2
1,614,603 + 0.3
1,614,603 + 0.5
1,614,606 - 2.2
1,614,611 - -1.3
1,614,612 + 0.7
1,614,617 + 0.2
1,614,640 - 0.2
1,614,644 + 0.9
1,614,664 + -0.4
1,614,696 - 0.2
1,614,712 + 0.5
1,614,747 + 0.7
1,614,757 - 0.3
1,614,824 - 1.0
1,614,832 + 0.3
1,614,832 - 0.0
1,614,836 - -1.1
1,614,843 - 0.5
1,614,844 + -0.9
1,614,985 + -0.5
1,614,987 - 2.0
1,614,987 + -0.0
1,614,993 + -0.6
1,614,994 + 0.3
1,615,017 - 1.5
1,615,405 - 0.6
1,615,523 - 9038 mRNA_670 0.14 -1.0
1,615,989 - 9038 mRNA_670 0.29 -0.2
1,615,999 + 9038 mRNA_670 0.29 0.1
1,616,403 - 9038 mRNA_670 0.43 0.6
1,616,905 + 9038 mRNA_670 0.59 1.0
1,617,202 + 9038 mRNA_670 0.69 1.1
1,617,220 + 9038 mRNA_670 0.70 -0.7
1,617,812 + 9038 mRNA_670 0.89 0.5
1,617,910 - 1.9
1,618,126 - 2.3
1,618,206 + 0.1
1,618,221 - -1.8
1,618,355 - 0.5
1,618,375 + 0.5
1,618,386 + -1.9
1,618,390 + -0.5
1,618,423 + -1.1
1,618,502 + -1.0
1,618,504 + -0.1
1,618,527 + 1.2
1,618,531 + 0.6
1,618,823 - 9039 mRNA_671 0.15 1.9
1,619,121 + 9039 mRNA_671 0.27 2.7