Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_630

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_628: 8996 - K17894 GATA2 GATA-binding protein 2, at 1506988 to 1510110 8996 mRNA_630: 8998 - K10088 OS9 protein OS-9, at 1511055 to 1513202 8998 mRNA_631: 8999 - Hypothetical Protein, at 1514076 to 1515222 8999

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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1,510,055 - -0.2
1,510,065 - -0.2
1,510,073 + 0.4
1,510,197 - 0.8
1,510,200 - -0.9
1,510,314 + -1.4
1,510,354 - -0.3
1,510,366 + -1.3
1,510,394 - -0.1
1,510,495 - 1.2
1,510,496 - -0.1
1,510,500 - -1.0
1,510,522 - -1.2
1,510,524 - 0.7
1,510,528 - 0.1
1,510,531 + 0.1
1,510,537 + -1.1
1,510,644 + -0.4
1,510,690 - -0.4
1,510,694 - -1.0
1,510,728 + 1.9
1,510,734 + 0.1
1,510,738 - 0.4
1,510,812 - 1.8
1,510,824 - -0.3
1,510,888 - -2.3
1,510,893 + 0.4
1,510,896 - -0.1
1,510,901 + 0.2
1,510,911 + -0.1
1,510,915 - -0.0
1,510,916 + -0.5
1,510,921 + 1.5
1,510,927 + -1.7
1,510,935 - -1.8
1,510,972 - -1.8
1,511,054 - 0.6
1,512,129 - 8998 mRNA_630 0.50 1.2
1,512,265 - 8998 mRNA_630 0.56 0.4
1,512,420 - 8998 mRNA_630 0.64 0.3
1,512,702 - 8998 mRNA_630 0.77 0.3
1,512,844 + 8998 mRNA_630 0.83 -0.9
1,512,854 + 8998 mRNA_630 0.84 1.7
1,512,967 - 8998 mRNA_630 0.89 1.0
1,512,988 - 0.0
1,512,989 + 1.2
1,512,995 + 1.5
1,512,997 + -0.9
1,513,001 - -0.8
1,513,125 - 1.1
1,513,426 - -0.0
1,513,433 - 0.9
1,513,450 - 0.2
1,513,559 - 0.2
1,513,629 + 0.9
1,513,684 - 0.4
1,513,716 + 0.0
1,513,717 + 0.5
1,513,724 + -0.3
1,513,738 + 0.3
1,513,744 + 0.7
1,513,863 - 0.3
1,513,914 - 0.7
1,513,943 - -0.2
1,513,978 - 0.1
1,514,044 - -0.3
1,514,047 + 1.4
1,514,120 - -0.5
1,514,138 + 0.9
1,514,163 - -1.7
1,514,169 + -1.1
1,514,173 - 1.1
1,514,181 - -0.2
1,514,187 - 0.9
1,514,188 + 1.2
1,514,190 + 1.7
1,514,202 - 8999 mRNA_631 0.11 0.2