Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_600

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_600: 8968 - K17785 IMMT, FCJ1, MNOS2 mitofilin, at 1443273 to 1445582 8968 mRNA_601: 8969 - K01784 galE, GALE UDP-glucose 4-epimerase, at 1446011 to 1447734 8969

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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1,442,414 - -1.1
1,442,548 + -1.4
1,442,548 + -1.0
1,442,554 - -1.0
1,442,660 + -0.4
1,442,814 + 2.2
1,442,818 - -0.3
1,442,819 + 1.7
1,442,955 - -0.8
1,442,988 + -0.4
1,443,083 + -0.9
1,443,091 - -0.9
1,443,105 - 0.0
1,443,122 - -0.6
1,443,136 + -1.4
1,443,136 + 0.2
1,443,138 - -0.0
1,443,152 + 0.0
1,443,420 - 2.7
1,443,432 - 2.8
1,443,570 - 8968 mRNA_600 0.13 0.6
1,443,573 + 8968 mRNA_600 0.13 -0.2
1,443,666 + 8968 mRNA_600 0.17 -0.7
1,443,736 - 8968 mRNA_600 0.20 1.0
1,443,977 - 8968 mRNA_600 0.30 0.5
1,444,019 + 8968 mRNA_600 0.32 0.5
1,444,019 - 8968 mRNA_600 0.32 -0.9
1,444,161 + 8968 mRNA_600 0.38 -0.0
1,444,283 + 8968 mRNA_600 0.44 -2.1
1,444,604 - 8968 mRNA_600 0.58 0.4
1,444,631 + 8968 mRNA_600 0.59 -0.2
1,444,767 + 8968 mRNA_600 0.65 0.6
1,445,058 + 8968 mRNA_600 0.77 -0.1
1,445,521 - -0.5
1,445,629 - -0.2
1,445,632 + -0.6
1,445,651 + 0.7
1,445,908 - -1.2
1,445,915 - 1.9
1,445,921 - 0.6
1,445,926 + 1.2
1,445,927 - -1.7
1,445,932 + 1.1
1,445,937 - -2.2
1,445,943 + 1.8
1,445,958 + -1.2