Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_570

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_569: 8937 - K07059 K07059 uncharacterized protein, at 1362223 to 1362868 8937 mRNA_570: 8938 - Hypothetical Protein, at 1363774 to 1366185 8938 mRNA_571: 8939 - Hypothetical Protein, at 1366768 to 1367604 8939

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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1,362,935 - 0.4
1,362,948 + 0.2
1,362,973 + 1.9
1,363,106 - -0.8
1,363,123 + -0.4
1,363,125 - -0.2
1,363,250 + 0.3
1,363,255 + 2.3
1,363,257 - 1.8
1,363,288 - -1.0
1,363,390 + 0.5
1,363,421 - 2.0
1,363,422 + -0.2
1,363,428 + -1.3
1,363,436 + 0.8
1,363,437 + 0.3
1,363,438 + 0.1
1,363,439 + -0.6
1,363,440 - -0.7
1,363,726 - -1.1
1,363,729 + 0.0
1,363,735 - 2.1
1,363,887 - -0.1
1,363,906 + 1.5
1,363,918 + -0.3
1,363,919 - -1.4
1,364,057 - 8938 mRNA_570 0.12 1.1
1,364,202 - 8938 mRNA_570 0.18 -1.8
1,364,212 + 8938 mRNA_570 0.18 1.2
1,364,221 - 8938 mRNA_570 0.19 1.8
1,364,222 + 8938 mRNA_570 0.19 1.1
1,364,227 + 8938 mRNA_570 0.19 1.6
1,364,227 + 8938 mRNA_570 0.19 -0.3
1,364,245 + 8938 mRNA_570 0.20 1.4
1,364,356 + 8938 mRNA_570 0.24 -0.1
1,364,391 + 8938 mRNA_570 0.26 2.3
1,364,402 + 8938 mRNA_570 0.26 0.2
1,364,541 + 8938 mRNA_570 0.32 0.5
1,364,542 - 8938 mRNA_570 0.32 -0.6
1,364,543 + 8938 mRNA_570 0.32 0.2
1,364,544 + 8938 mRNA_570 0.32 0.6
1,364,550 + 8938 mRNA_570 0.32 -0.1
1,364,588 - 8938 mRNA_570 0.34 -0.6
1,364,592 - 8938 mRNA_570 0.34 -0.4
1,365,285 - 8938 mRNA_570 0.63 -1.0
1,365,721 + 8938 mRNA_570 0.81 -2.3
1,365,872 - 8938 mRNA_570 0.87 0.3
1,366,589 + -0.8
1,366,760 - -1.9