Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_524

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_523: 8891 - K11644 SIN3A paired amphipathic helix protein Sin3a, at 1244383 to 1249643 8891 mRNA_524: 8892 - KOG0519 Sensory transduction histidine kinase, at 1249927 to 1253514 8892 mRNA_525: 8893 - K01265 map methionyl aminopeptidase, at 1253926 to 1255834 8893

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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1,249,220 + 0.4
1,249,497 - 0.5
1,249,520 + 0.1
1,249,735 + -0.6
1,249,746 - 0.5
1,249,762 + 0.1
1,249,774 - -0.7
1,249,965 + -1.2
1,249,973 + -0.0
1,250,098 - -2.2
1,250,111 + 0.2
1,250,251 + 0.9
1,250,267 - -0.1
1,250,294 - 8892 mRNA_524 0.10 1.1
1,250,301 + 8892 mRNA_524 0.10 -0.4
1,250,308 + 8892 mRNA_524 0.11 -0.2
1,250,860 - 8892 mRNA_524 0.26 0.1
1,250,898 - 8892 mRNA_524 0.27 -0.2
1,251,293 - 8892 mRNA_524 0.38 -0.3
1,252,494 + 8892 mRNA_524 0.72 0.3
1,252,505 - 8892 mRNA_524 0.72 -0.9
1,252,750 + 8892 mRNA_524 0.79 1.4
1,253,504 - -0.6
1,253,593 - -1.2
1,253,793 + -1.3