Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_437

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_436: 8804 - HMMPfam-CLASP N terminal-PF12348, at 1010568 to 1012798 8804 mRNA_437: 8805 - Hypothetical Protein, at 1013650 to 1014960 8805 mRNA_438: 8806 - Hypothetical Protein, at 1015167 to 1016657 8806

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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1,013,177 + -1.5
1,013,252 - -3.1
1,013,328 - -1.5
1,013,758 + 0.8
1,014,068 - 8805 mRNA_437 0.32 0.3
1,014,154 + 8805 mRNA_437 0.38 2.2
1,014,155 - 8805 mRNA_437 0.39 0.7
1,014,222 + 8805 mRNA_437 0.44 2.3
1,014,687 + 8805 mRNA_437 0.79 1.2
1,014,844 + -0.2
1,014,859 + 1.8
1,014,956 - -0.4
1,015,112 - -0.6
1,015,112 - 0.6
1,015,122 + 1.2
1,015,130 - -0.1
1,015,273 + -1.8
1,015,435 + 8806 mRNA_438 0.18 -1.3
1,015,541 + 8806 mRNA_438 0.25 0.1
1,015,543 - 8806 mRNA_438 0.25 -0.3
1,015,576 + 8806 mRNA_438 0.27 0.2
1,015,576 - 8806 mRNA_438 0.27 1.9
1,015,618 + 8806 mRNA_438 0.30 1.1
1,015,833 - 8806 mRNA_438 0.45 -0.0
1,015,942 - 8806 mRNA_438 0.52 0.9