Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_236

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_235: 8603 - KOG2614 Kynurenine 3-monooxygenase and related flavoprotein monooxygenases, at 578724 to 580674 8603 mRNA_236: 8604 - HMMPfam-F-box domain-PF00646,ProSiteProfiles-F-box domain profile.-PS50181,SUPERFAMILY--SSF52047, at 580930 to 582126 8604 mRNA_237: 8605 - K08098 PIGZ, SMP3 phosphatidylinositol glycan, class Z, at 582180 to 584217 8605

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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580,148 - 8603 mRNA_235 0.73 0.4
580,168 + 8603 mRNA_235 0.74 -0.5
580,288 + 8603 mRNA_235 0.80 0.3
580,739 + -2.1
580,777 + -0.1
580,779 - 0.3
580,780 - -0.1
580,788 + 1.4
580,789 + 1.1
580,927 + -0.4
581,073 - 8604 mRNA_236 0.12 0.4
581,493 - 8604 mRNA_236 0.47 -1.6
581,642 - 8604 mRNA_236 0.59 1.8
581,950 - 8604 mRNA_236 0.85 0.5
581,957 + 8604 mRNA_236 0.86 -1.0
582,034 - -2.2
582,076 + -2.7
582,105 + -0.7
582,106 + 2.3