Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_199

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_198: 8566 - K02952 RP-S13, rpsM small subunit ribosomal protein S13, at 485103 to 485929 8566 mRNA_199: 8567 - Hypothetical Protein, at 486367 to 488620 8567 mRNA_200: 8568 - K15541 MPE1 protein MPE1, at 489424 to 492149 8568

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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486,175 - -0.4
486,178 - -0.0
486,186 + -1.3
486,191 + 1.8
486,196 + -0.8
486,198 + -1.9
486,218 - 0.4
486,402 - 0.4
486,484 - 0.3
486,640 + 8567 mRNA_199 0.12 -0.3
486,760 + 8567 mRNA_199 0.17 0.7
487,369 + 8567 mRNA_199 0.44 0.1
487,493 - 8567 mRNA_199 0.50 -1.0
487,514 - 8567 mRNA_199 0.51 -1.1
487,534 + 8567 mRNA_199 0.52 1.1
487,658 - 8567 mRNA_199 0.57 -1.6
487,670 - 8567 mRNA_199 0.58 0.1
487,817 + 8567 mRNA_199 0.64 -0.2
487,845 + 8567 mRNA_199 0.66 0.6
487,966 - 8567 mRNA_199 0.71 1.5
487,981 + 8567 mRNA_199 0.72 -0.4
487,998 + 8567 mRNA_199 0.72 0.0
488,138 + 8567 mRNA_199 0.79 -0.2
488,241 - 8567 mRNA_199 0.83 0.1
488,243 - 8567 mRNA_199 0.83 0.1
488,455 - 0.8
488,854 - 0.4
488,859 - -2.5
488,873 - -1.1
488,873 - -0.0
488,896 + 0.7
488,983 + -1.3
489,000 - -1.8
489,141 - -0.9
489,280 - -1.1
489,291 - -0.4
489,298 + 0.1
489,308 + -0.4
489,308 + 1.1
489,310 - 0.1
489,322 + -0.7
489,484 + 0.1
489,591 - -0.6