Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_182

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_181: 8549 - K12870 ISY1 pre-mRNA-splicing factor ISY1, at 441723 to 442875 8549 mRNA_182: 8550 - K19828 MTG1 mitochondrial GTPase 1, at 442975 to 444845 8550 mRNA_183: 8551 - KOG4463 Uncharacterized conserved protein, at 445053 to 446538 8551

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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443,054 - -0.2
443,148 + 2.5
443,505 + 8550 mRNA_182 0.28 1.0
444,963 - -1.7
444,970 - -1.2
444,986 - -1.5
445,107 + -0.6
445,272 - 8551 mRNA_183 0.15 0.9
445,273 + 8551 mRNA_183 0.15 -1.7
445,280 + 8551 mRNA_183 0.15 -1.2
445,410 - 8551 mRNA_183 0.24 -1.5
445,419 + 8551 mRNA_183 0.25 -0.5