Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_158

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_157: 8525 - KOG3066 Translin-associated protein X, at 391378 to 392552 8525 mRNA_158: 8526 - BLAST expressed protein [Cryptococcus neoformans var. neofo..., at 392732 to 393571 8526 mRNA_159: 8527 - Hypothetical Protein, at 394494 to 395592 8527

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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391,740 - 8525 mRNA_157 0.31 0.8
391,776 - 8525 mRNA_157 0.34 1.5
392,222 - 8525 mRNA_157 0.72 -0.7
392,255 - 8525 mRNA_157 0.75 0.8
392,641 - 0.4
392,768 - -0.4
393,026 - 8526 mRNA_158 0.35 0.5
393,249 + 8526 mRNA_158 0.62 -0.8
393,362 - 8526 mRNA_158 0.75 -0.8
393,929 - -1.8
393,963 + -0.7
393,967 - 0.9
394,007 + 1.3
394,047 - 0.3
394,061 + -1.3
394,070 + 0.8
394,221 + -0.3
394,222 - 0.0
394,223 - 0.1
394,226 - -0.2
394,228 + -0.6
394,228 + 1.3
394,234 - 0.7
394,236 + -0.8
394,242 - 0.2
394,252 - -0.8
394,259 + 1.5
394,260 + 0.7
394,260 + 1.3
394,263 - -0.5
394,265 + -0.6
394,265 - -0.4
394,288 - 0.0
394,306 - -0.0
394,333 + 1.0
394,361 - 0.4
394,363 + -0.5
394,375 - -0.4
394,375 - 0.1
394,375 - -1.3
394,382 + 0.3
394,382 + 0.7
394,383 - -1.2
394,399 - -0.7
394,407 + 1.1
394,411 - -0.3
394,413 + 2.8
394,419 + -3.4
394,438 - -0.1
394,444 + -0.7
394,445 - 0.6
394,558 - 0.3
394,568 + -0.4
394,570 + 0.3