Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_153

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_153: 8521 - KOG4826 C-8,7 sterol isomerase, at 383470 to 384442 8521 mRNA_154: 8522 - Hypothetical Protein, at 384974 to 388118 8522

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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382,485 + -0.3
382,524 + -0.2
382,624 - 1.1
382,927 - -0.2
382,993 + -1.0
383,068 + 1.5
383,076 + -1.0
383,201 + -0.2
383,209 - 1.3
383,218 + -1.1
383,238 + 0.8
383,326 + -0.1
383,353 + 2.0
383,374 + 0.6
383,386 + -2.7
383,502 + -0.7
383,505 - -0.2
383,610 - 8521 mRNA_153 0.14 -0.5
383,637 - 8521 mRNA_153 0.17 0.3
384,076 - 8521 mRNA_153 0.62 0.4
384,106 + 8521 mRNA_153 0.65 1.3
384,230 + 8521 mRNA_153 0.78 -0.3
384,344 - 8521 mRNA_153 0.90 -0.6
384,476 - -1.5
384,645 - -0.5
384,651 - 0.8
384,654 - -0.5
384,655 - -1.2
384,655 - 2.0
384,672 + 1.5
384,672 - -0.5
384,720 + 0.2
385,298 + 8522 mRNA_154 0.10 -1.9
385,308 - 8522 mRNA_154 0.11 -0.2
385,332 - 8522 mRNA_154 0.11 -0.4