Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_89

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_89: 8457 - HMMPfam-Polysaccharide deacetylase-PF01522,ProSiteProfiles-NodB homology domain profile.-PS51677,SUPERFAMILY--SSF88713, at 213359 to 214966 8457 mRNA_90: 8458 - Hypothetical Protein, at 215330 to 215955 8458

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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212,375 - -0.7
212,410 - 0.4
212,494 + 0.4
212,502 - -0.1
212,504 - -0.4
212,508 + 1.7
212,512 - 1.1
212,524 + 0.5
212,544 - 0.4
212,623 + 0.1
212,623 + -0.8
212,641 + -2.0
212,645 + 1.6
212,652 + -0.6
212,652 - -0.3
212,658 + -1.4
212,663 - -0.2
212,669 + -2.4
212,670 - 0.0
212,677 - -0.8
212,695 - -0.4
212,695 + -0.2
212,801 - 0.8
212,807 + -0.1
212,811 + -0.6
212,821 + -0.8
212,835 - 0.2
212,844 - 0.4
212,853 + -1.0
212,855 + -0.0
212,873 + 1.0
212,875 - 0.5
212,880 + -0.5
212,880 + 0.1
212,900 - -0.9
212,901 - -0.5
212,906 - -0.0
212,933 - 0.1
212,940 - 4.2
212,950 - 1.1
212,961 - 0.1
212,983 + -0.3
213,005 - 1.1
213,025 - 1.5
213,029 + 1.2
213,039 - -1.6
213,043 + 1.0
213,053 + -0.9
213,059 - -0.3
213,066 - 1.9
213,067 + -0.9
213,073 + -0.5
213,074 + -0.7
213,099 + -0.0
213,110 - -1.5
213,112 + -1.7
213,118 + -2.7
213,122 + 0.8
213,125 - 0.8
213,126 + 0.1
213,126 + -0.1
213,127 - -0.1
213,139 + 1.5
213,141 - 0.3
213,156 + 0.5
213,158 + -0.6
213,159 + -2.1
213,165 - 0.3
213,168 - 0.1
213,175 - 0.5
213,292 - -0.2
213,334 + -0.3
213,340 - 1.9
213,345 + -0.0
213,361 + 0.1
213,367 + 0.5
213,459 - -2.4
213,460 + -0.1
213,466 - -0.6
213,475 + 1.5
213,484 + 0.4
213,507 - 0.2
213,510 + 0.0
213,679 - 8457 mRNA_89 0.20 -0.3
213,762 - 8457 mRNA_89 0.25 -0.9
213,793 + 8457 mRNA_89 0.27 -0.2
214,219 + 8457 mRNA_89 0.53 0.3
214,384 + 8457 mRNA_89 0.64 1.6
214,528 - 8457 mRNA_89 0.73 -0.1
214,647 - 8457 mRNA_89 0.80 -0.7
215,100 + 0.9
215,561 - 8458 mRNA_90 0.37 -1.0
215,827 + 8458 mRNA_90 0.79 0.1
215,848 + 8458 mRNA_90 0.83 0.8
215,849 - 8458 mRNA_90 0.83 0.3