Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_61

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_60: 8428 - Hypothetical Protein, at 142423 to 142761 8428 mRNA_61: 8429 - SUPERFAMILY--SSF52047, at 143371 to 144965 8429 mRNA_62: 8430 - HMMPfam-HPP family-PF04982, at 145631 to 146829 8430

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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142,688 - 8428 mRNA_60 0.78 -0.9
142,706 + 8428 mRNA_60 0.83 -1.0
143,007 + -0.2
143,119 + -1.1
143,119 - 0.5
143,397 - -0.4
143,399 - 0.4
143,401 + 0.8
143,408 - -1.4
143,426 + -0.4
143,559 + 8429 mRNA_61 0.12 0.4
143,986 + 8429 mRNA_61 0.39 0.6
144,260 - 8429 mRNA_61 0.56 0.7
144,288 + 8429 mRNA_61 0.57 1.5
144,296 + 8429 mRNA_61 0.58 -1.2
144,433 + 8429 mRNA_61 0.67 -2.7
144,441 + 8429 mRNA_61 0.67 3.1
144,635 + 8429 mRNA_61 0.79 0.0
144,738 + 8429 mRNA_61 0.86 0.8
144,862 - -0.3
144,870 + 2.1
144,873 - -0.3
144,880 + 1.4
144,881 - 0.8
145,005 + -0.4
145,026 - 0.1
145,033 + 0.8
145,043 - 1.2
145,047 - 0.1
145,049 + -2.5
145,175 - 1.6
145,201 + 0.8
145,206 - 1.2
145,337 + -2.3
145,344 - -0.0
145,344 + 0.2
145,350 + 0.0
145,453 + 0.4
145,471 + 2.3
145,476 - -1.0
145,483 - 2.1
145,493 - -1.0
145,495 + -0.3
145,632 + -0.2
145,640 + -0.8
145,645 + -0.3
145,788 - 8430 mRNA_62 0.13 -0.0
145,955 + 8430 mRNA_62 0.27 0.5