Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_18

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_17: 8385 - K00856 E2.7.1.20, ADK adenosine kinase, at 48620 to 50142 8385 mRNA_18: 8386 - KOG1515 Arylacetamide deacetylase, at 50473 to 51921 8386 mRNA_19: 8387 - KOG1399 Flavin-containing monooxygenase, at 52301 to 54654 8387

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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49,948 + 8385 mRNA_17 0.87 -0.6
50,542 + 1.5
50,663 + 8386 mRNA_18 0.13 0.5
50,904 - 8386 mRNA_18 0.30 0.0
50,943 + 8386 mRNA_18 0.32 -1.1
50,946 - 8386 mRNA_18 0.33 0.2
51,073 - 8386 mRNA_18 0.41 -0.2
51,155 + 8386 mRNA_18 0.47 1.1
51,432 - 8386 mRNA_18 0.66 0.6
51,550 + 8386 mRNA_18 0.74 0.2
51,561 - 8386 mRNA_18 0.75 -1.2
51,562 + 8386 mRNA_18 0.75 0.3
51,654 + 8386 mRNA_18 0.82 -0.9
51,655 - 8386 mRNA_18 0.82 1.1
51,845 - 1.5
51,845 + -0.2
51,846 + -1.7
51,962 - 0.5
52,120 + -1.4
52,128 - 1.1
52,132 - -0.4
52,157 + -0.1
52,815 + 8387 mRNA_19 0.22 -2.4
52,819 - 8387 mRNA_19 0.22 1.2
52,852 - 8387 mRNA_19 0.23 0.4
52,876 - 8387 mRNA_19 0.24 0.4
52,889 - 8387 mRNA_19 0.25 -0.1
52,897 + 8387 mRNA_19 0.25 1.9