Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8478

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8477: 16845 - KOG4405 GDP dissociation inhibitor, at 1319063 to 1321156 16845 mRNA_8478: 16846 - HMMPfam-Alpha/beta hydrolase family-PF12697,SUPERFAMILY--SSF53474, at 1321525 to 1322743 16846 mRNA_8479: 16847 - Hypothetical Protein, at 1322853 to 1323925 16847

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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1,321,330 + -0.4
1,321,473 - -0.0
1,321,574 - -1.0
1,321,583 - -0.4
1,321,583 + 1.9
1,321,661 - 16846 mRNA_8478 0.11 0.1
1,321,750 - 16846 mRNA_8478 0.18 0.3
1,321,754 - 16846 mRNA_8478 0.19 -0.9
1,321,792 - 16846 mRNA_8478 0.22 0.2
1,321,887 - 16846 mRNA_8478 0.30 2.1
1,321,911 - 16846 mRNA_8478 0.32 -2.8
1,322,071 + 16846 mRNA_8478 0.45 -1.8
1,322,441 + 16846 mRNA_8478 0.75 -0.2
1,322,768 + -1.1
1,322,820 - 0.2
1,322,828 + 2.0
1,322,830 + 0.2
1,322,833 + 0.5
1,322,908 - -2.4
1,322,961 - 16847 mRNA_8479 0.10 -0.0
1,323,274 + 16847 mRNA_8479 0.39 1.2
1,323,379 - 16847 mRNA_8479 0.49 -0.1
1,323,379 - 16847 mRNA_8479 0.49 -1.6
1,323,541 + 16847 mRNA_8479 0.64 -0.4
1,323,712 + 16847 mRNA_8479 0.80 -0.5
1,323,731 - 16847 mRNA_8479 0.82 2.0