Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8390

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8389: 16757 - Hypothetical Protein, at 1098543 to 1099640 16757 mRNA_8390: 16758 - K00387 SUOX sulfite oxidase, at 1099792 to 1101469 16758 mRNA_8391: 16759 - HMMPfam-Peptide N-acetyl-beta-D-glucosaminyl asparaginase amidase A-PF12222, at 1101594 to 1103958 16759

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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1,098,807 - 16757 mRNA_8389 0.24 0.5
1,098,925 + 16757 mRNA_8389 0.35 0.6
1,098,926 + 16757 mRNA_8389 0.35 0.3
1,098,983 - 16757 mRNA_8389 0.40 0.5
1,099,090 + 16757 mRNA_8389 0.50 1.5
1,099,227 + 16757 mRNA_8389 0.62 -0.4
1,099,383 - 16757 mRNA_8389 0.77 -0.1
1,099,414 - 16757 mRNA_8389 0.79 0.5
1,099,636 - -0.4
1,099,644 + -0.3
1,099,949 + -1.1
1,099,957 + -0.5
1,100,118 - 16758 mRNA_8390 0.19 0.8
1,100,207 + 16758 mRNA_8390 0.25 -2.1
1,100,237 - 16758 mRNA_8390 0.27 -0.5
1,100,674 - 16758 mRNA_8390 0.53 -0.2
1,100,695 - 16758 mRNA_8390 0.54 -0.4
1,100,803 - 16758 mRNA_8390 0.60 -0.6
1,101,082 + 16758 mRNA_8390 0.77 -0.5
1,101,239 - 16758 mRNA_8390 0.86 0.3
1,101,394 + -1.1
1,101,539 - 0.0
1,101,542 + 0.2
1,101,557 + -0.2
1,101,561 + -0.2
1,101,562 - 0.2
1,101,701 + 0.1
1,101,732 + 0.9
1,102,160 + 16759 mRNA_8391 0.24 1.9