Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8302

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8301: 16669 - K20361 USO1 intracellular protein transport protein USO1, at 882227 to 887090 16669 mRNA_8302: 16670 - HMMPfam-Major Facilitator Superfamily-PF07690,SUPERFAMILY--SSF103473, at 887295 to 889058 16670

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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886,821 + 0.7
886,958 - 2.5
886,961 + -1.7
887,112 + 2.0
887,220 - 0.6
887,236 - -0.6
887,236 - -1.1
887,269 + 1.1
887,275 + 0.6
887,401 + -0.1
887,414 + -1.2
887,414 + 0.2
887,416 - 1.2
887,541 + 16670 mRNA_8302 0.14 -0.5
887,543 - 16670 mRNA_8302 0.14 -1.0
887,545 + 16670 mRNA_8302 0.14 -0.9
887,554 + 16670 mRNA_8302 0.15 -0.9
887,567 - 16670 mRNA_8302 0.15 -0.0
888,433 - 16670 mRNA_8302 0.65 -1.5
888,578 + 16670 mRNA_8302 0.73 0.2
888,675 - 16670 mRNA_8302 0.78 -1.4
888,687 + 16670 mRNA_8302 0.79 1.8
889,107 - -2.0
889,306 - 0.5
889,306 + -0.6
889,450 + 1.5
889,568 + 1.0