Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8278

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8277: 16645 - Hypothetical Protein, at 824512 to 825100 16645 mRNA_8278: 16646 - K16330 K16330 pseudouridylate synthase / pseudouridine kinase, at 825362 to 828181 16646 mRNA_8279: 16647 - BLAST Type-1 angiotensin II receptor-associated protein [Ch..., at 829000 to 829923 16647

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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824,563 - -2.5
824,719 - 16645 mRNA_8277 0.35 0.8
824,741 - 16645 mRNA_8277 0.39 -1.1
824,883 + 16645 mRNA_8277 0.63 -1.0
825,269 - 1.4
825,281 - 1.4
825,609 + 1.7
826,311 - 16646 mRNA_8278 0.34 -1.0
826,338 + 16646 mRNA_8278 0.35 -0.5
826,471 - 16646 mRNA_8278 0.39 0.1
827,224 - 16646 mRNA_8278 0.66 0.4
827,326 - 16646 mRNA_8278 0.70 -1.5
827,374 - 16646 mRNA_8278 0.71 -1.1
827,386 + 16646 mRNA_8278 0.72 0.9
827,513 - 16646 mRNA_8278 0.76 -0.0
827,528 + 16646 mRNA_8278 0.77 0.4
827,655 + 16646 mRNA_8278 0.81 -2.2
828,247 - 0.6
828,405 + -2.4
828,668 + -1.4
828,801 - 0.5
828,812 + 0.6
828,820 - -0.5
828,839 + 0.0
828,843 + -0.2
828,845 + -0.7
828,848 - -0.4
828,983 - -0.8
828,984 + -0.2
828,986 - 1.4
828,994 - 3.0
828,999 + -2.1
829,001 + -3.1
829,005 - 0.5