Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8235

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8234: 16602 - KOG3702 Nuclear polyadenylated RNA binding protein, at 729442 to 731463 16602 mRNA_8235: 16603 - Hypothetical Protein, at 731881 to 732842 16603 mRNA_8236: 16604 - Interpro Fungal protein of unknown function (DUF1770) 0, at 733012 to 733833 16604

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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732,013 - 16603 mRNA_8235 0.14 0.3
732,023 + 16603 mRNA_8235 0.15 0.5
732,477 - 16603 mRNA_8235 0.62 -0.3
732,605 + 16603 mRNA_8235 0.75 -1.4
732,617 + 16603 mRNA_8235 0.77 -0.1
732,767 + 0.9
732,768 - -1.7
732,938 + -2.1
733,093 + -0.5
733,232 - 16604 mRNA_8236 0.27 0.5
733,239 - 16604 mRNA_8236 0.28 -0.2
733,659 - 16604 mRNA_8236 0.79 0.1
733,685 - 16604 mRNA_8236 0.82 0.0
733,692 - 16604 mRNA_8236 0.83 0.5
733,692 - 16604 mRNA_8236 0.83 0.5
733,701 + 16604 mRNA_8236 0.84 -0.2
733,725 - 16604 mRNA_8236 0.87 0.9
733,835 + -1.4
733,837 + 0.0