Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8231

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8230: 16598 - K09668 LARGE glycosyltransferase-like protein LARGE, at 722627 to 724673 16598 mRNA_8231: 16599 - KOG0927 Predicted transporter (ABC superfamily), at 725179 to 727142 16599 mRNA_8232: 16600 - K12623 LSM4 U6 snRNA-associated Sm-like protein LSm4, at 727305 to 728231 16600

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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724,317 - 16598 mRNA_8230 0.83 1.7
724,584 - 1.0
724,753 - -0.7
724,908 + -0.9
724,914 - 2.4
724,917 - -0.3
724,923 + 0.4
725,046 + 0.3
725,094 - -0.0
725,191 - 0.2
725,210 + 2.3
725,238 - 0.4
725,241 - 0.1
725,363 + 1.8
725,641 + 16599 mRNA_8231 0.24 1.3
725,670 - 16599 mRNA_8231 0.25 -1.4
725,949 + 16599 mRNA_8231 0.39 -0.2
726,208 - 16599 mRNA_8231 0.52 -0.6
726,268 + 16599 mRNA_8231 0.55 0.4
726,364 - 16599 mRNA_8231 0.60 -0.0
726,377 + 16599 mRNA_8231 0.61 0.0
726,534 + 16599 mRNA_8231 0.69 0.1
726,685 + 16599 mRNA_8231 0.77 3.0
726,685 + 16599 mRNA_8231 0.77 -1.7
726,967 + 0.3
727,120 - 0.8
727,522 + 16600 mRNA_8232 0.23 0.7
727,530 - 16600 mRNA_8232 0.24 1.0