Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8126

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8125: 16493 - Hypothetical Protein, at 478218 to 479543 16493 mRNA_8126: 16494 - BLAST putative 15-O-acetyltransferase Tri3 [Moniliophthora ..., at 479641 to 482114 16494 mRNA_8127: 16495 - BLAST CigA protein-like protein [Phycomyces blakesleean..., at 482813 to 485416 16495

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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478,774 - 16493 mRNA_8125 0.42 0.0
479,196 + 16493 mRNA_8125 0.74 -1.0
479,202 + 16493 mRNA_8125 0.74 0.1
479,510 + -1.5
479,714 - 0.9
480,244 + 16494 mRNA_8126 0.24 0.1
480,675 - 16494 mRNA_8126 0.42 -0.1
480,951 - 16494 mRNA_8126 0.53 0.1
481,225 + 16494 mRNA_8126 0.64 -2.5
481,564 - 16494 mRNA_8126 0.78 0.3
481,678 - 16494 mRNA_8126 0.82 0.3
481,947 - -1.6
482,528 - 2.1