Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8125

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8124: 16492 - HMMPfam-FHA domain-PF00498,ProSiteProfiles-Forkhead-associated (FHA) domain profile.-PS50006,SMART-Forkhead associated domain-SM00240,SUPERFAMILY--SSF49879, at 474474 to 477508 16492 mRNA_8125: 16493 - Hypothetical Protein, at 478218 to 479543 16493 mRNA_8126: 16494 - BLAST putative 15-O-acetyltransferase Tri3 [Moniliophthora ..., at 479641 to 482114 16494

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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477,389 + 1.4
477,393 - -1.0
477,418 + 0.8
477,726 + 0.2
477,728 + -0.0
477,740 - 1.3
477,743 + 0.5
477,743 + -1.0
477,743 + -0.4
477,880 + 1.4
477,889 - 2.2
477,994 - 0.7
478,074 + -0.1
478,308 - 0.8
478,442 - 16493 mRNA_8125 0.17 -0.0
478,774 - 16493 mRNA_8125 0.42 0.0
479,196 + 16493 mRNA_8125 0.74 -1.0
479,202 + 16493 mRNA_8125 0.74 0.1
479,510 + -1.5
479,714 - 0.9
480,244 + 16494 mRNA_8126 0.24 0.1