Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8109

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8108: 16476 - K17637 EXOC2, SEC5 exocyst complex component 2, at 429862 to 433885 16476 mRNA_8109: 16477 - K00679 E2.3.1.158 phospholipid-diacylglycerol acyltransferase, at 434477 to 437050 16477 mRNA_8110: 16478 - HMMPfam-G protein-coupled glucose receptor regulating Gpa2-PF11710,SUPERFAMILY--SSF81321, at 437598 to 439156 16478

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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433,840 + 0.3
433,943 + 0.5
433,945 - 0.0
433,966 + 0.4
433,972 - -0.1
433,973 - -2.0
433,974 - 0.4
434,100 + -0.9
434,111 + -0.4
434,119 + 0.2
434,226 - -0.6
434,245 + -2.2
434,548 + -0.3
435,618 - 16477 mRNA_8109 0.44 1.0
436,013 - 16477 mRNA_8109 0.60 -0.9
436,154 + 16477 mRNA_8109 0.65 3.8
436,431 - 16477 mRNA_8109 0.76 -0.4
436,599 + 16477 mRNA_8109 0.82 -0.2
436,722 + 16477 mRNA_8109 0.87 -1.2
436,865 - -1.1
436,953 - 0.5
436,962 - -0.6
437,009 - -1.4
437,051 + -0.0
437,068 + 1.3
437,140 - -0.1
437,167 - -0.2
437,182 + -0.4
437,185 + -0.3
437,190 - -1.7
437,191 + 0.0
437,195 + 2.7
437,203 + 0.4
437,204 - -1.1
437,207 - -1.8
437,208 - -1.8
437,210 - 1.3
437,213 - 0.0
437,238 - 0.9
437,253 + 1.2
437,272 - -0.3
437,278 + -0.3
437,280 + 1.2
437,298 - 0.8
437,306 + 0.3
437,309 + 0.7
437,310 + 0.5
437,337 + -0.4
437,338 - 0.5
437,365 + -0.1
437,379 + 0.2
437,382 + -0.8
437,382 - 0.1
437,390 - 0.0
437,395 + -0.4
437,395 - -0.5
437,407 - 1.9
437,413 + -0.1
437,421 - 0.2
437,423 - -1.5
437,425 + 1.9
437,426 + -0.0
437,428 + -0.7
437,470 + 0.1
437,474 - 0.5
437,477 + -0.8
437,483 - 0.6
437,485 - -0.1
437,490 + -2.7
437,496 + 0.5
437,500 + 0.4
437,508 + 0.6
437,512 + 0.4
437,516 + -1.9
437,518 + -0.4
437,521 + 1.7
437,527 - 0.7
437,529 - -0.9
437,533 + -0.4
437,539 - 0.3
437,539 + 0.2
437,546 + 0.3
437,570 - 0.2
437,594 + -0.2
437,676 - 0.6
437,688 + 0.7
437,737 - 0.1
437,830 + 16478 mRNA_8110 0.15 -1.3
437,834 + 16478 mRNA_8110 0.15 0.3
437,976 - 16478 mRNA_8110 0.24 -0.5
437,997 - 16478 mRNA_8110 0.26 0.7