Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8081

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8080: 16448 - HMMPfam-Alpha/beta hydrolase family-PF12697,SUPERFAMILY--SSF53474, at 373552 to 376166 16448 mRNA_8081: 16449 - K00905 BCKDK [3-methyl-2-oxobutanoate dehydrogenase (acetyl-transferring)] kinase, at 376342 to 377975 16449 mRNA_8082: 16450 - BLAST zinc-binding oxidoreductase [Moesziomyces antarcticus..., at 378453 to 379519 16450

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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375,518 - 16448 mRNA_8080 0.75 1.2
376,215 - 0.5
376,227 - 0.5
376,336 - -2.2
376,351 - 0.1
376,351 + -2.2
376,479 - 1.3
376,496 + 1.1
376,894 + 16449 mRNA_8081 0.34 2.3
376,930 + 16449 mRNA_8081 0.36 1.2
377,207 - 16449 mRNA_8081 0.53 -0.9
377,208 + 16449 mRNA_8081 0.53 0.3
377,955 + 0.9
378,240 + 1.0
378,371 + 0.3
378,383 - 0.5
378,390 - -1.5