Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8021

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8020: 16388 - K19841 STE50 protein STE50, at 224633 to 227369 16388 mRNA_8021: 16389 - HMMPfam-NAD(P)-binding Rossmann-like domain-PF13450,SUPERFAMILY--SSF51905, at 227452 to 229516 16389 mRNA_8022: 16390 - BLAST Ubiquinone biosynthesis protein coq9, mitochondrial [..., at 229628 to 230640 16390

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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226,756 - 16388 mRNA_8020 0.78 0.8
226,785 + 16388 mRNA_8020 0.79 -3.4
226,926 - 16388 mRNA_8020 0.84 1.5
227,166 + 0.6
227,373 - 0.5
227,374 - -0.4
227,393 - -1.3
227,808 - 16389 mRNA_8021 0.17 -0.9
227,818 - 16389 mRNA_8021 0.18 0.2
227,929 - 16389 mRNA_8021 0.23 0.1
228,336 + 16389 mRNA_8021 0.43 -0.6
228,371 - 16389 mRNA_8021 0.45 0.9
228,511 + 16389 mRNA_8021 0.51 -0.5
228,709 - 16389 mRNA_8021 0.61 -1.6
229,109 - 16389 mRNA_8021 0.80 -0.2
229,158 + 16389 mRNA_8021 0.83 0.3
229,280 + 16389 mRNA_8021 0.89 0.3
229,408 - 0.2
229,411 + 0.6
229,546 - -0.3
229,557 + 1.4
229,579 + -1.2
229,580 - -0.8