Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7970

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7969: 16337 - Hypothetical Protein, at 114657 to 115244 16337 mRNA_7970: 16338 - SUPERFAMILY--SSF144232, at 115514 to 116661 16338 mRNA_7971: 16339 - HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232, at 116954 to 120210 16339

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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114,530 + 0.9
114,531 + -1.8
114,647 + -0.9
114,651 - -0.1
114,724 - 16337 mRNA_7969 0.11 0.3
114,731 + 16337 mRNA_7969 0.13 -1.7
114,760 - 16337 mRNA_7969 0.18 0.6
114,840 - 16337 mRNA_7969 0.31 -1.3
114,980 - 16337 mRNA_7969 0.55 0.7
114,998 - 16337 mRNA_7969 0.58 1.0
115,000 - 16337 mRNA_7969 0.58 0.9
115,078 - 16337 mRNA_7969 0.72 0.8
115,087 - 16337 mRNA_7969 0.73 -0.2
115,087 + 16337 mRNA_7969 0.73 -1.5
115,090 - 16337 mRNA_7969 0.74 0.4
115,093 - 16337 mRNA_7969 0.74 -1.0
115,182 + 16337 mRNA_7969 0.89 0.2
115,234 + -1.9
115,284 - 0.0
115,306 + -0.9
115,309 - -0.3
115,534 + -0.6
115,698 + 16338 mRNA_7970 0.16 -0.0
115,717 - 16338 mRNA_7970 0.18 0.9
115,819 - 16338 mRNA_7970 0.27 0.6
115,839 + 16338 mRNA_7970 0.28 1.3
115,966 - 16338 mRNA_7970 0.39 1.4
116,048 + 16338 mRNA_7970 0.47 1.8
116,051 - 16338 mRNA_7970 0.47 0.9
116,114 + 16338 mRNA_7970 0.52 0.9
116,117 + 16338 mRNA_7970 0.53 -0.7
116,135 - 16338 mRNA_7970 0.54 1.0
116,170 + 16338 mRNA_7970 0.57 -1.1
116,185 - 16338 mRNA_7970 0.58 -1.5
116,267 + 16338 mRNA_7970 0.66 -0.7
116,290 - 16338 mRNA_7970 0.68 1.1
116,404 + 16338 mRNA_7970 0.78 0.8
116,430 - 16338 mRNA_7970 0.80 0.4
116,431 + 16338 mRNA_7970 0.80 -1.1
116,437 - 16338 mRNA_7970 0.80 2.7
116,440 - 16338 mRNA_7970 0.81 2.4
116,488 + 16338 mRNA_7970 0.85 0.0
116,586 - 0.1
116,594 - 2.5
116,736 + 0.8
116,793 + -0.0
116,797 - 2.5
117,105 + 0.7
117,159 + -2.4
117,226 - -0.6
117,229 - -2.0
117,247 - 0.1