Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7919

Experiments: 40 hrs High Buoyancy

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7919: 16287 - K01489 cdd, CDA cytidine deaminase, at 22432 to 23509 16287 mRNA_7920: 16288 - K02219 CKS1 cyclin-dependent kinase regulatory subunit CKS1, at 24120 to 24922 16288

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
remove
21,538 + 1.8
21,584 - 0.8
21,590 + 0.6
21,590 + -0.2
21,596 + 0.5
21,607 + 2.8
21,618 + -2.3
21,755 - -0.3
21,763 + -2.8
21,764 + -0.6
21,770 + -0.9
21,813 - -0.5
21,815 - 1.1
21,815 + -0.9
21,819 - -0.5
21,819 + 0.3
21,820 - -0.5
21,821 + -2.1
21,824 - -1.2
21,831 - -1.1
21,833 - 0.3
21,835 - 2.2
21,836 + -1.1
21,837 - -2.0
21,837 + -0.9
21,838 + -0.2
21,842 + 0.9
21,845 - -0.8
21,847 + -0.0
21,848 + -0.4
21,851 + -0.7
21,867 + 0.3
21,868 - 2.1
21,870 - 1.5
21,897 + 1.0
21,932 - 2.7
22,031 - 0.1
22,122 + 1.1
22,162 + -0.4
22,181 + -0.3
22,193 + 0.7
22,297 + 1.0
22,436 + 1.0
22,474 - 0.8
22,743 - 16287 mRNA_7919 0.29 -1.1
22,752 + 16287 mRNA_7919 0.30 -0.7
22,759 + 16287 mRNA_7919 0.30 2.1
22,920 + 16287 mRNA_7919 0.45 0.6
22,960 - 16287 mRNA_7919 0.49 1.3
23,214 + 16287 mRNA_7919 0.73 0.6
23,443 + -0.2
23,865 + 0.6
23,900 + 2.4
23,902 - 1.1
23,950 + -1.7
24,079 + -0.4
24,136 + 0.0
24,299 - 16288 mRNA_7920 0.22 0.6
24,319 + 16288 mRNA_7920 0.25 0.1
24,323 - 16288 mRNA_7920 0.25 -0.9
24,434 + 16288 mRNA_7920 0.39 0.0