Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7691

Experiments: 40 hrs High Buoyancy

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7690: 16058 - BLAST proteophosphoglycan ppg4 [Moesziomyces aphidis DSM 70..., at 846247 to 848747 16058 mRNA_7691: 16059 - K10770 ALKBH8 alkylated DNA repair protein alkB homolog 8, at 849187 to 849939 16059 mRNA_7692: 16060 - HMMPfam-Cell division control protein 14, SIN component-PF08045, at 850554 to 851989 16060

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
remove
848,233 - 16058 mRNA_7690 0.79 -0.9
848,233 + 16058 mRNA_7690 0.79 1.6
848,330 - 16058 mRNA_7690 0.83 -1.9
848,336 - 16058 mRNA_7690 0.84 0.1
848,511 - -0.9
848,515 + 0.2
848,520 - -0.9
848,631 - -0.3
848,643 + 0.5
848,652 - -0.1
848,755 + -0.1
848,786 - -0.8
848,909 + -0.9
848,936 - 0.3
848,981 + -1.8
849,129 - -1.2
849,137 - 0.3
849,242 - 0.8
849,341 - 16059 mRNA_7691 0.20 1.5
849,385 - 16059 mRNA_7691 0.26 0.3
849,394 - 16059 mRNA_7691 0.27 -0.7
849,399 - 16059 mRNA_7691 0.28 -1.4
849,471 + 16059 mRNA_7691 0.38 -1.1
849,506 + 16059 mRNA_7691 0.42 1.6
849,506 - 16059 mRNA_7691 0.42 -0.9
849,594 + 16059 mRNA_7691 0.54 -0.4
849,830 + 16059 mRNA_7691 0.85 -0.2
849,977 + -3.0
849,985 + -1.3
850,133 + 1.6
850,274 - -1.5
850,289 + -0.1
850,299 + -0.3
850,419 - 1.6
850,582 - 0.3
850,711 - 16060 mRNA_7692 0.11 1.6
850,732 + 16060 mRNA_7692 0.12 -2.0
850,765 + 16060 mRNA_7692 0.15 -0.7