Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7650

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7649: 16017 - K13346 PEX10 peroxin-10, at 764006 to 765401 16017 mRNA_7650: 16018 - K08008 NOX, GP91 NADPH oxidase, at 765571 to 768508 16018 mRNA_7651: 16019 - K03671 trxA thioredoxin 1, at 769234 to 769814 16019

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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765,953 + 16018 mRNA_7650 0.13 -0.3
766,075 - 16018 mRNA_7650 0.17 0.8
766,095 - 16018 mRNA_7650 0.18 0.3
766,177 + 16018 mRNA_7650 0.21 -2.1
766,577 + 16018 mRNA_7650 0.34 -1.9
766,795 + 16018 mRNA_7650 0.42 1.5
767,063 - 16018 mRNA_7650 0.51 -0.9
767,070 + 16018 mRNA_7650 0.51 -1.8
767,108 + 16018 mRNA_7650 0.52 -0.0
767,277 + 16018 mRNA_7650 0.58 1.5
767,516 + 16018 mRNA_7650 0.66 -1.2
767,524 - 16018 mRNA_7650 0.66 0.2
767,711 - 16018 mRNA_7650 0.73 -0.3
767,749 + 16018 mRNA_7650 0.74 -0.5
767,855 - 16018 mRNA_7650 0.78 -0.9
767,968 - 16018 mRNA_7650 0.82 0.5
768,004 + 16018 mRNA_7650 0.83 -0.0
768,156 - 16018 mRNA_7650 0.88 -0.0
768,161 + 16018 mRNA_7650 0.88 1.1
768,270 - -1.7
768,454 + 0.6
768,454 - 0.7
768,588 - 1.6
768,896 - 1.7
768,908 + -1.5
768,922 + -0.7
769,015 - -0.2
769,027 - 1.4
769,066 + -1.3
769,177 - -0.7
769,194 + 0.6
769,320 - 16019 mRNA_7651 0.15 -1.4
769,340 - 16019 mRNA_7651 0.18 -0.4
769,341 + 16019 mRNA_7651 0.18 -0.9
769,372 + 16019 mRNA_7651 0.24 0.8
769,498 - 16019 mRNA_7651 0.45 0.2