Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7648

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7647: 16015 - KOG2741 Dimeric dihydrodiol dehydrogenase, at 759091 to 760573 16015 mRNA_7648: 16016 - K01705 LYS4 homoaconitate hydratase, at 761221 to 763593 16016 mRNA_7649: 16017 - K13346 PEX10 peroxin-10, at 764006 to 765401 16017

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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760,731 - -1.0
760,743 + -0.1
760,765 + 0.0
760,769 - -0.2
761,026 - 0.6
761,039 + 0.3
761,055 + -0.2
761,188 - 0.2
761,188 - -0.1
761,480 - 16016 mRNA_7648 0.11 -1.3
761,489 + 16016 mRNA_7648 0.11 -0.8
761,757 - 16016 mRNA_7648 0.23 -2.4
761,806 - 16016 mRNA_7648 0.25 -1.3
762,324 - 16016 mRNA_7648 0.46 0.0
763,468 - 1.4
763,597 - 0.5
763,603 - -0.5
763,613 - -1.2
763,616 + -3.0
763,619 - -1.0
763,724 - 1.3
763,741 - 1.0
763,741 - -1.4
764,064 - -0.0