Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7423

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7422: 15790 - Hypothetical Protein, at 239461 to 241066 15790 mRNA_7423: 15791 - K01568 PDC, pdc pyruvate decarboxylase, at 241820 to 244654 15791 mRNA_7424: 15792 - Hypothetical Protein, at 245039 to 245546 15792 mRNA_7425: 15793 - Hypothetical Protein, at 245564 to 246232 15793

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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241,077 - -0.0
241,162 - 0.1
241,197 + 0.3
241,211 - -0.0
241,365 + -0.6
241,485 - 2.3
241,526 + 0.2
241,581 - -1.3
241,581 - 0.6
241,642 + -0.7
241,648 - 0.3
241,656 - -1.4
241,666 + 0.8
241,669 - 0.8
241,675 + 0.0
241,684 + -0.6
241,687 + -1.1
242,132 - 15791 mRNA_7423 0.11 -0.8
242,583 + 15791 mRNA_7423 0.27 1.1
242,671 - 15791 mRNA_7423 0.30 -0.9
242,699 + 15791 mRNA_7423 0.31 -0.7
242,856 + 15791 mRNA_7423 0.37 0.7
242,978 - 15791 mRNA_7423 0.41 0.2
243,075 - 15791 mRNA_7423 0.44 -0.7
243,160 + 15791 mRNA_7423 0.47 0.9
243,563 + 15791 mRNA_7423 0.61 -1.9
243,741 + 15791 mRNA_7423 0.68 -1.4
243,886 + 15791 mRNA_7423 0.73 -0.1
244,167 - 15791 mRNA_7423 0.83 0.2
244,300 - 15791 mRNA_7423 0.87 -1.0
244,346 - 15791 mRNA_7423 0.89 -1.0
244,425 - 1.1
244,429 - -0.4
244,441 + -0.0
244,446 + 1.0
244,472 + -0.4
244,482 + -1.9
244,494 - 0.8
244,536 - 0.1
244,537 + 1.0
244,539 + -0.9
244,574 + -1.1
244,588 - 1.0
244,601 - -1.7
244,616 + -0.5
244,619 - -0.5
244,637 - 0.1
244,669 + -0.3
244,687 + 1.2
244,792 - -0.3
244,793 - 0.5
244,794 + -0.9
244,807 + -0.3
244,811 - 0.2
244,833 - -0.2
244,949 + 0.8
244,951 - -0.1
244,959 + 0.5
244,959 - 0.3
245,229 + 15792 mRNA_7424 0.37 -2.1
245,398 - 15792 mRNA_7424 0.71 1.5