Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7366

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7365: 15733 - Hypothetical Protein, at 102943 to 104194 15733 mRNA_7366: 15734 - SUPERFAMILY--SSF57701, at 104446 to 105512 15734 mRNA_7367: 15735 - HMMPfam-MYND finger-PF01753,ProSitePatterns-Zinc finger MYND-type signature.-PS01360,ProSiteProfiles-Zinc finger MYND-type profile.-PS50865,SUPERFAMILY--SSF144232, at 106324 to 107108 15735

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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103,447 - 15733 mRNA_7365 0.40 0.2
103,574 - 15733 mRNA_7365 0.50 -0.1
103,580 + 15733 mRNA_7365 0.51 -0.1
103,858 + 15733 mRNA_7365 0.73 -2.0
104,182 + 2.1
104,346 + -1.8
104,461 - -0.6
104,583 + 15734 mRNA_7366 0.13 0.1
104,749 + 15734 mRNA_7366 0.28 -0.3
104,875 - 15734 mRNA_7366 0.40 -2.2
104,968 + 15734 mRNA_7366 0.49 0.6
105,039 + 15734 mRNA_7366 0.56 -0.1
105,136 - 15734 mRNA_7366 0.65 0.0
105,190 - 15734 mRNA_7366 0.70 0.2
105,193 + 15734 mRNA_7366 0.70 -2.4
105,656 - -1.1
105,677 + -0.2
105,758 + -1.2
105,799 + -0.3
105,805 - 1.2
105,809 - 0.6
105,911 + -0.1
105,913 - 0.9
105,915 + 0.1
105,938 - 0.8
105,942 - 0.8
105,943 + 0.9
105,955 - -2.2
106,231 - -0.4
106,235 + 0.5
106,237 - -2.3
106,254 - 0.4
106,271 + 0.7
106,271 - 0.9
106,274 + -1.0
106,387 + -0.5
106,387 - 0.5
106,408 + 15735 mRNA_7367 0.11 1.1
106,408 - 15735 mRNA_7367 0.11 -1.7