Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7356

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7355: 15723 - HMMPfam-MYND finger-PF01753,ProSiteProfiles-Zinc finger MYND-type profile.-PS50865,SUPERFAMILY--SSF144232, at 79424 to 80346 15723 mRNA_7356: 15724 - HMMPfam-MYND finger-PF01753,ProSitePatterns-Zinc finger MYND-type signature.-PS01360,ProSiteProfiles-Zinc finger MYND-type profile.-PS50865,SUPERFAMILY--SSF144232, at 80898 to 81821 15724 mRNA_7357: 15725 - Hypothetical Protein, at 82234 to 84306 15725

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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80,002 - 15723 mRNA_7355 0.63 0.5
80,292 - 0.4
80,293 + -1.4
80,394 - 0.6
80,501 - -0.2
80,501 - -0.3
80,501 - -2.0
80,501 - 1.2
80,512 + 1.4
80,563 + 0.6
80,693 - 1.4
80,702 - -0.6
80,724 - 0.6
81,121 - 15724 mRNA_7356 0.24 0.7
81,268 - 15724 mRNA_7356 0.40 0.8
81,277 - 15724 mRNA_7356 0.41 0.9
81,579 - 15724 mRNA_7356 0.74 -0.5
81,880 - -0.4
81,963 + -1.0
81,979 + -0.8
82,026 + 0.7
82,171 + -0.7
82,315 + 0.2
82,633 + 15725 mRNA_7357 0.19 -1.0
82,795 - 15725 mRNA_7357 0.27 -0.7