Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7354

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7353: 15721 - K00927 PGK, pgk phosphoglycerate kinase, at 75097 to 76913 15721 mRNA_7354: 15722 - HMMPfam-Taurine catabolism dioxygenase TauD, TfdA family-PF02668,SUPERFAMILY--SSF51197, at 77148 to 79118 15722 mRNA_7355: 15723 - HMMPfam-MYND finger-PF01753,ProSiteProfiles-Zinc finger MYND-type profile.-PS50865,SUPERFAMILY--SSF144232, at 79424 to 80346 15723

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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77,107 + 0.1
77,158 - 0.5
77,186 + -0.9
77,197 - -0.6
77,230 - -0.2
77,579 - 15722 mRNA_7354 0.22 -0.2
78,189 - 15722 mRNA_7354 0.53 1.7
78,743 + 15722 mRNA_7354 0.81 -0.5
78,864 - 15722 mRNA_7354 0.87 -0.2
78,885 - 15722 mRNA_7354 0.88 -0.1
79,196 + -1.1
79,204 - 0.3
79,210 - -0.9
79,346 + -0.4
79,350 + -0.6
79,377 - -0.2
79,381 + -1.3
79,396 + 2.4
79,530 - 15723 mRNA_7355 0.11 -1.1
79,545 - 15723 mRNA_7355 0.13 0.3
80,002 - 15723 mRNA_7355 0.63 0.5