Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7335

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7334: 15702 - HMMPfam-RTA1 like protein-PF04479, at 29500 to 31086 15702 mRNA_7335: 15703 - Hypothetical Protein, at 31308 to 31781 15703 mRNA_7336: 15704 - Hypothetical Protein, at 31786 to 32791 15704

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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30,341 - 15702 mRNA_7334 0.53 -0.7
30,512 - 15702 mRNA_7334 0.64 0.3
30,819 + 15702 mRNA_7334 0.83 -1.2
30,820 - 15702 mRNA_7334 0.83 -0.7
30,846 + 15702 mRNA_7334 0.85 0.1
30,902 - 15702 mRNA_7334 0.88 2.3
30,920 - 15702 mRNA_7334 0.89 0.8
30,947 - -2.1
31,065 - -0.5
31,237 + 2.5
31,239 + -0.9
31,259 + -0.4
31,263 + 0.4
31,271 + 0.6
31,285 - 0.2
31,291 - 1.2
31,293 - 1.0
31,299 - 1.5
31,301 - -0.5
31,303 - -0.2
31,315 - 1.4
31,326 - -0.7
31,330 - 1.4
31,340 + 0.9
31,341 - 0.0
31,342 - 1.0
31,372 - 15703 mRNA_7335 0.14 0.9
31,383 + 15703 mRNA_7335 0.16 -0.7
31,385 - 15703 mRNA_7335 0.16 -1.3
31,389 - 15703 mRNA_7335 0.17 -2.3
31,397 + 15703 mRNA_7335 0.19 -0.2
31,410 + 15703 mRNA_7335 0.22 1.8
31,434 + 15703 mRNA_7335 0.27 0.5
31,458 + 15703 mRNA_7335 0.32 2.1
31,532 - 15703 mRNA_7335 0.47 -0.4
32,270 - 15704 mRNA_7336 0.48 -0.3
32,426 - 15704 mRNA_7336 0.64 -1.4
32,589 + 15704 mRNA_7336 0.80 1.5
32,700 + 2.1
32,708 - 0.6
32,748 - -1.8