Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7308

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7307: 15675 - Hypothetical Protein, at 1359048 to 1360624 15675 mRNA_7308: 15676 - Hypothetical Protein, at 1360588 to 1362752 15676 mRNA_7309: 15677 - KOG0803 Predicted E3 ubiquitin ligase, at 1363408 to 1369017 15677

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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1,359,853 - 15675 mRNA_7307 0.51 1.8
1,359,995 - 15675 mRNA_7307 0.60 0.5
1,360,101 + 15675 mRNA_7307 0.67 0.6
1,360,153 + 15675 mRNA_7307 0.70 0.1
1,360,280 + 15675 mRNA_7307 0.78 -0.1
1,360,424 + 15675 mRNA_7307 0.87 0.4
1,360,425 + 15675 mRNA_7307 0.87 0.9
1,360,548 - -1.9
1,360,613 + 0.5
1,360,650 + -0.4
1,360,694 - 1.5
1,360,967 - 15676 mRNA_7308 0.18 -0.1
1,361,109 + 15676 mRNA_7308 0.24 1.2
1,361,190 - 15676 mRNA_7308 0.28 0.1
1,361,433 + 15676 mRNA_7308 0.39 0.5
1,361,896 - 15676 mRNA_7308 0.60 -0.1
1,362,992 - 0.3
1,363,018 + -2.4
1,363,187 - -0.5
1,363,317 + 0.1
1,363,361 + 0.0
1,363,381 - 0.5
1,363,432 - 0.0
1,363,488 + 0.6
1,363,499 - 0.2
1,363,519 + -0.1